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Computational approaches allow the determination of the association of … Modern drug discovery has the power to identify potential modulators for multiple targets from millions of compounds. Alternative models were pre-trained by learning … · here, we introduce transformer-based chemical language model variants for the generative design of dual-target compounds. · our findings demonstrate the ability of explainable machine learning to bridge between predictions and intuitive chemical analysis and reveal characteristic substructures of … · we define a compound ai system as a system that tackles ai tasks using multiple interacting components, including multiple calls to models, retrievers, or external tools. · in this paper, we developed ai-based methods to generate dual-target compounds against two therapeutic targets, where two bioactivity prediction models were incorporated into … Considering the large disparity in the number of actives vs inactive compounds for dual activity, the f1, g-mean and recall scores were also considered, with the svm models identified as the. · polygon embeds chemical space and iteratively samples it to generate new molecular structures; These are rewarded by the predicted ability to inhibit each of two protein … Ultimately, ad-cp and ad-xgb consistently selected more diverse compounds than their base models (chemprop and xgboost, respectively, supporting information file 1, table s2) while also …